Carnation DB

Dca23659.1

Annotation

6-exons
f-1
sp|B9I135_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1093638#GO:0016788;GO:0006629#1F1P0C
Os01t0748500-01 Similar to anther-specific proline-rich protein APG.
Repeat List (scaffold2362)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23659.1	405	730	750	23.2	326	52	1e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9I135_POPTR	27	360	369	90.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23659.1	410	728	750	21.06	319	48	2e-89
Target_name	Start	End	Length	Cov(%)
Os01t0748500-01	26	360	364	92.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2362	Augus-PASA	mRNA	7740	22373	.	-	.	ID=Dca23659.1;Parent=Dca23659
scaffold2362	Augus-PASA	exon	7740	8011	.	-	.	ID=Dca23659.1.exon1;Parent=Dca23659.1
scaffold2362	Augus-PASA	exon	8580	8808	.	-	.	ID=Dca23659.1.exon2;Parent=Dca23659.1
scaffold2362	Augus-PASA	exon	11186	11416	.	-	.	ID=Dca23659.1.exon3;Parent=Dca23659.1
scaffold2362	Augus-PASA	exon	16248	16372	.	-	.	ID=Dca23659.1.exon4;Parent=Dca23659.1
scaffold2362	Augustus	exon	18116	18295	.	-	.	ID=Dca23659.1.exon5;Parent=Dca23659.1
scaffold2362	Augustus	exon	21158	22373	.	-	.	ID=Dca23659.1.exon6;Parent=Dca23659.1