Carnation DB

Dca23734.1

Annotation

5-exons
f-1
sp|F6HZ66_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00760#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT1G02790.1 | Symbols: PGA4 | polygalacturonase 4 | chr1:610681-612225 REVERSE LENGTH=422
Repeat List (scaffold237)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23734.1	13	409	414	32.6	397	32	2e-54
Target_name	Start	End	Length	Cov(%)
sp\|F6HZ66_VITVI	12	409	415	95.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23734.1	26	408	414	31.64	383	34	8e-50
Target_name	Start	End	Length	Cov(%)
AT1G02790.1	40	414	422	88.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold237	Augustus	mRNA	147799	149855	.	-	.	ID=Dca23734.1;Parent=Dca23734
scaffold237	Augustus	exon	147799	148029	.	-	.	ID=Dca23734.1.exon1;Parent=Dca23734.1
scaffold237	Augustus	exon	148297	148513	.	-	.	ID=Dca23734.1.exon2;Parent=Dca23734.1
scaffold237	Augustus	exon	148761	149056	.	-	.	ID=Dca23734.1.exon3;Parent=Dca23734.1
scaffold237	Augustus	exon	149229	149540	.	-	.	ID=Dca23734.1.exon4;Parent=Dca23734.1
scaffold237	Augustus	exon	149667	149855	.	-	.	ID=Dca23734.1.exon5;Parent=Dca23734.1