Dca23863.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2382)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23863.1 |
18 |
455 |
455 |
35.82 |
438 |
33 |
1e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
508 |
1501 |
33.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23863.1 |
39 |
210 |
455 |
12.08 |
172 |
32 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2382 |
Augustus |
mRNA |
4784 |
6242 |
. |
+ |
. |
ID=Dca23863.1;Parent=Dca23863 |
| scaffold2382 |
Augustus |
exon |
4784 |
5804 |
. |
+ |
. |
ID=Dca23863.1.exon1;Parent=Dca23863.1 |
| scaffold2382 |
Augustus |
exon |
5896 |
6242 |
. |
+ |
. |
ID=Dca23863.1.exon2;Parent=Dca23863.1 |
