Dca2389.1
Annotation
- 3-exons
- f-1
- sp|A5BCC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040650#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1081)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2389.1 |
123 |
1398 |
1462 |
45.69 |
1276 |
50 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCC7_VITVI |
1 |
1303 |
1316 |
99.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2389.1 |
374 |
1399 |
1462 |
24.82 |
1026 |
35 |
3e-171
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1387 |
1401 |
72.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1081 |
Augustus |
mRNA |
29541 |
34392 |
. |
+ |
. |
ID=Dca2389.1;Parent=Dca2389 |
| scaffold1081 |
Augustus |
exon |
29541 |
30824 |
. |
+ |
. |
ID=Dca2389.1.exon1;Parent=Dca2389.1 |
| scaffold1081 |
Augustus |
exon |
30930 |
33843 |
. |
+ |
. |
ID=Dca2389.1.exon2;Parent=Dca2389.1 |
| scaffold1081 |
Augustus |
exon |
34202 |
34392 |
. |
+ |
. |
ID=Dca2389.1.exon3;Parent=Dca2389.1 |
