Carnation DB

Dca23906.1

Annotation

8-exons
f-1
sp|B9HVB1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805055#GO:0016020;GO:0015079#1F0P1C
Repeat List (scaffold2387)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23906.1	8	807	807	75.58	800	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HVB1_POPTR	9	847	847	99.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23906.1	4	807	807	71.87	804	69	0
Target_name	Start	End	Length	Cov(%)
AT1G60160.1	2	827	827	99.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2387	Augustus	mRNA	22924	27855	.	+	.	ID=Dca23906.1;Parent=Dca23906
scaffold2387	Augustus	exon	22924	23199	.	+	.	ID=Dca23906.1.exon1;Parent=Dca23906.1
scaffold2387	Augustus	exon	24210	24438	.	+	.	ID=Dca23906.1.exon2;Parent=Dca23906.1
scaffold2387	Augustus	exon	24533	24781	.	+	.	ID=Dca23906.1.exon3;Parent=Dca23906.1
scaffold2387	Augustus	exon	25462	25686	.	+	.	ID=Dca23906.1.exon4;Parent=Dca23906.1
scaffold2387	Augustus	exon	25772	25824	.	+	.	ID=Dca23906.1.exon5;Parent=Dca23906.1
scaffold2387	Augustus	exon	26016	26130	.	+	.	ID=Dca23906.1.exon6;Parent=Dca23906.1
scaffold2387	Augustus	exon	26223	26477	.	+	.	ID=Dca23906.1.exon7;Parent=Dca23906.1
scaffold2387	Augus-PASA	exon	26834	27855	.	+	.	ID=Dca23906.1.exon8;Parent=Dca23906.1