Dca23965.1
Annotation
- 3-exons
- f-1
- sp|Q2QUJ4_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g16060#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2390)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23965.1 |
1 |
176 |
221 |
38.46 |
176 |
42 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QUJ4_ORYSJ |
232 |
420 |
1050 |
18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2390 |
Augustus |
mRNA |
40049 |
41528 |
. |
+ |
. |
ID=Dca23965.1;Parent=Dca23965 |
| scaffold2390 |
Augustus |
exon |
40049 |
40373 |
. |
+ |
. |
ID=Dca23965.1.exon1;Parent=Dca23965.1 |
| scaffold2390 |
Augustus |
exon |
40479 |
40570 |
. |
+ |
. |
ID=Dca23965.1.exon2;Parent=Dca23965.1 |
| scaffold2390 |
Augustus |
exon |
41280 |
41528 |
. |
+ |
. |
ID=Dca23965.1.exon3;Parent=Dca23965.1 |
