Carnation DB

Dca24002.1

Annotation

7-exons
f-1
sp|D7SUI9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g04350#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
Os01t0179200-01 Syntaxin, N-terminal domain containing protein.
Repeat List (scaffold2396)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24002.1	47	303	315	68.57	257	83	4e-105
Target_name	Start	End	Length	Cov(%)
sp\|D7SUI9_VITVI	49	308	340	76.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24002.1	43	303	315	59.68	261	71	2e-100
Target_name	Start	End	Length	Cov(%)
Os01t0179200-01	54	312	345	75.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2396	Augustus	mRNA	32802	40147	.	+	.	ID=Dca24002.1;Parent=Dca24002
scaffold2396	Augustus	exon	32802	32891	.	+	.	ID=Dca24002.1.exon1;Parent=Dca24002.1
scaffold2396	Augustus	exon	36524	36659	.	+	.	ID=Dca24002.1.exon2;Parent=Dca24002.1
scaffold2396	Augustus	exon	38030	38280	.	+	.	ID=Dca24002.1.exon3;Parent=Dca24002.1
scaffold2396	Augustus	exon	38362	38534	.	+	.	ID=Dca24002.1.exon4;Parent=Dca24002.1
scaffold2396	Augustus	exon	39345	39542	.	+	.	ID=Dca24002.1.exon5;Parent=Dca24002.1
scaffold2396	Augustus	exon	39956	40018	.	+	.	ID=Dca24002.1.exon6;Parent=Dca24002.1
scaffold2396	Augustus	exon	40111	40147	.	+	.	ID=Dca24002.1.exon7;Parent=Dca24002.1