Carnation DB

Dca24039.1

Annotation

8-exons
f-1
sp|D7TBV2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g04610#GO:0003676;GO:0000166#2F0P0C
AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6744029-6746133 FORWARD LENGTH=337
Repeat List (scaffold24)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24039.1	1	312	321	47.04	312	44	1e-56
Target_name	Start	End	Length	Cov(%)
sp\|D7TBV2_VITVI	1	330	347	95.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24039.1	1	310	321	39.25	310	36	9e-32
Target_name	Start	End	Length	Cov(%)
AT5G19960.1	1	323	337	95.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold24	Augustus	mRNA	126777	129906	.	+	.	ID=Dca24039.1;Parent=Dca24039
scaffold24	Augustus	exon	126777	126887	.	+	.	ID=Dca24039.1.exon1;Parent=Dca24039.1
scaffold24	Augustus	exon	127916	128391	.	+	.	ID=Dca24039.1.exon2;Parent=Dca24039.1
scaffold24	Augustus	exon	128609	128669	.	+	.	ID=Dca24039.1.exon3;Parent=Dca24039.1
scaffold24	Augustus	exon	128789	128839	.	+	.	ID=Dca24039.1.exon4;Parent=Dca24039.1
scaffold24	Augustus	exon	129136	129204	.	+	.	ID=Dca24039.1.exon5;Parent=Dca24039.1
scaffold24	Augustus	exon	129308	129373	.	+	.	ID=Dca24039.1.exon6;Parent=Dca24039.1
scaffold24	Augustus	exon	129469	129537	.	+	.	ID=Dca24039.1.exon7;Parent=Dca24039.1
scaffold24	Augustus	exon	129844	129906	.	+	.	ID=Dca24039.1.exon8;Parent=Dca24039.1