Carnation DB

Dca24138.1

Annotation

6-exons
f-1
sp|B9GQ12_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_550771#unknown#0F0P0C
AT1G20580.1 | Symbols: | Small nuclear ribonucleoprotein family protein | chr1:7128979-7130371 FORWARD LENGTH=131
Repeat List (scaffold240)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24138.1	1	130	329	34.95	130	88	2e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9GQ12_POPTR	1	131	132	99.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24138.1	1	130	329	32.21	130	81	4e-56
Target_name	Start	End	Length	Cov(%)
AT1G20580.1	1	130	131	99.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold240	Augus-PASA	mRNA	466352	471862	.	+	.	ID=Dca24138.1;Parent=Dca24138
scaffold240	Augus-PASA	exon	466352	466510	.	+	.	ID=Dca24138.1.exon1;Parent=Dca24138.1
scaffold240	Augus-PASA	exon	468482	468534	.	+	.	ID=Dca24138.1.exon2;Parent=Dca24138.1
scaffold240	Augus-PASA	exon	468607	468673	.	+	.	ID=Dca24138.1.exon3;Parent=Dca24138.1
scaffold240	Augus-PASA	exon	468762	468818	.	+	.	ID=Dca24138.1.exon4;Parent=Dca24138.1
scaffold240	Augustus	exon	469202	469257	.	+	.	ID=Dca24138.1.exon5;Parent=Dca24138.1
scaffold240	Augustus	exon	471265	471862	.	+	.	ID=Dca24138.1.exon6;Parent=Dca24138.1