Carnation DB

Dca24268.1

Annotation

7-exons
f-1
sp|B9I679_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_243185#GO:0005524;GO:0004672#2F0P0C
AT4G03390.1 | Symbols: SRF3 | STRUBBELIG-receptor family 3 | chr4:1490912-1494553 REVERSE LENGTH=776
Repeat List (scaffold2413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24268.1	10	222	222	53.6	213	51	4e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9I679_POPTR	6	206	699	28.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24268.1	11	221	222	48.64	211	47	3e-50
Target_name	Start	End	Length	Cov(%)
AT4G03390.1	42	240	776	25.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2413	Augustus	mRNA	14522	19753	.	+	.	ID=Dca24268.1;Parent=Dca24268
scaffold2413	Augustus	exon	14522	14550	.	+	.	ID=Dca24268.1.exon1;Parent=Dca24268.1
scaffold2413	Augustus	exon	18159	18275	.	+	.	ID=Dca24268.1.exon2;Parent=Dca24268.1
scaffold2413	Augustus	exon	18369	18440	.	+	.	ID=Dca24268.1.exon3;Parent=Dca24268.1
scaffold2413	Augustus	exon	18819	18884	.	+	.	ID=Dca24268.1.exon4;Parent=Dca24268.1
scaffold2413	Augustus	exon	19001	19243	.	+	.	ID=Dca24268.1.exon5;Parent=Dca24268.1
scaffold2413	Augustus	exon	19335	19406	.	+	.	ID=Dca24268.1.exon6;Parent=Dca24268.1
scaffold2413	Augustus	exon	19684	19753	.	+	.	ID=Dca24268.1.exon7;Parent=Dca24268.1