Carnation DB

Dca24326.1

Annotation

7-exons
f-1
sp|Q41354_SILLA#SLM3 protein#Silene latifolia (White campion) (Bladder campion)#Name=SLM3#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24326.1	1	232	232	81.46	232	82	4e-104
Target_name	Start	End	Length	Cov(%)
sp\|Q41354_SILLA	1	227	227	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24326.1	4	232	232	51.29	229	52	8e-58
Target_name	Start	End	Length	Cov(%)
AT3G54340.1	3	231	232	98.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold242	Augus-PASA	mRNA	40612	42462	.	+	.	ID=Dca24326.1;Parent=Dca24326
scaffold242	Augus-PASA	exon	40612	40808	.	+	.	ID=Dca24326.1.exon1;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	40947	41013	.	+	.	ID=Dca24326.1.exon2;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	41443	41504	.	+	.	ID=Dca24326.1.exon3;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	41627	41726	.	+	.	ID=Dca24326.1.exon4;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	41975	42016	.	+	.	ID=Dca24326.1.exon5;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	42113	42157	.	+	.	ID=Dca24326.1.exon6;Parent=Dca24326.1
scaffold242	Augus-PASA	exon	42277	42462	.	+	.	ID=Dca24326.1.exon7;Parent=Dca24326.1