Carnation DB

Dca24437.1

Annotation

11-exons
f-1
sp|B9HMG6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832541#unknown#0F0P0C
AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | Prenyltransferase family protein | chr2:16501666-16504144 FORWARD LENGTH=375
Repeat List (scaffold243)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24437.1	28	367	368	63.85	340	70	1e-141
Target_name	Start	End	Length	Cov(%)
sp\|B9HMG6_POPTR	32	371	372	91.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24437.1	23	367	368	61.14	345	66	4e-130
Target_name	Start	End	Length	Cov(%)
AT2G39550.1	30	374	375	92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold243	Augustus	mRNA	67399	71131	.	+	.	ID=Dca24437.1;Parent=Dca24437
scaffold243	Augustus	exon	67399	67620	.	+	.	ID=Dca24437.1.exon1;Parent=Dca24437.1
scaffold243	Augustus	exon	68203	68278	.	+	.	ID=Dca24437.1.exon2;Parent=Dca24437.1
scaffold243	Augustus	exon	68362	68420	.	+	.	ID=Dca24437.1.exon3;Parent=Dca24437.1
scaffold243	Augustus	exon	68826	68965	.	+	.	ID=Dca24437.1.exon4;Parent=Dca24437.1
scaffold243	Augustus	exon	69857	69912	.	+	.	ID=Dca24437.1.exon5;Parent=Dca24437.1
scaffold243	Augustus	exon	70022	70098	.	+	.	ID=Dca24437.1.exon6;Parent=Dca24437.1
scaffold243	Augustus	exon	70189	70234	.	+	.	ID=Dca24437.1.exon7;Parent=Dca24437.1
scaffold243	Augustus	exon	70426	70550	.	+	.	ID=Dca24437.1.exon8;Parent=Dca24437.1
scaffold243	Augus-PASA	exon	70649	70716	.	+	.	ID=Dca24437.1.exon9;Parent=Dca24437.1
scaffold243	Augus-PASA	exon	70795	70882	.	+	.	ID=Dca24437.1.exon10;Parent=Dca24437.1
scaffold243	Augus-PASA	exon	70982	71131	.	+	.	ID=Dca24437.1.exon11;Parent=Dca24437.1