Dca24484.1
Annotation
- 3-exons
- f-1
- sp|Q9SL06_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05610#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2434)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24484.1 |
1 |
473 |
615 |
46.5 |
473 |
61 |
2e-167
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL06_ARATH |
66 |
517 |
780 |
57.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24484.1 |
1 |
473 |
615 |
40.81 |
473 |
50 |
3e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
43 |
545 |
591 |
85.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2434 |
Augustus |
mRNA |
21203 |
25933 |
. |
- |
. |
ID=Dca24484.1;Parent=Dca24484 |
| scaffold2434 |
Augustus |
exon |
21203 |
21628 |
. |
- |
. |
ID=Dca24484.1.exon1;Parent=Dca24484.1 |
| scaffold2434 |
Augustus |
exon |
24429 |
25132 |
. |
- |
. |
ID=Dca24484.1.exon2;Parent=Dca24484.1 |
| scaffold2434 |
Augustus |
exon |
25216 |
25933 |
. |
- |
. |
ID=Dca24484.1.exon3;Parent=Dca24484.1 |
