Carnation DB

Dca24542.1

Annotation

7-exons
f-1
sp|B9IF52_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_776216#GO:0005622;GO:0008270#1F0P1C
Os12t0233400-01 Zinc finger, C2H2-like domain containing protein.
Repeat List (scaffold244)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24542.1	10	238	238	57.14	229	50	2e-72
Target_name	Start	End	Length	Cov(%)
sp\|B9IF52_POPTR	4	266	266	98.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24542.1	27	238	238	50.84	212	48	4e-63
Target_name	Start	End	Length	Cov(%)
Os12t0233400-01	20	275	276	92.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold244	Augustus	mRNA	91714	94000	.	+	.	ID=Dca24542.1;Parent=Dca24542
scaffold244	Augustus	exon	91714	91827	.	+	.	ID=Dca24542.1.exon1;Parent=Dca24542.1
scaffold244	Augustus	exon	92238	92263	.	+	.	ID=Dca24542.1.exon2;Parent=Dca24542.1
scaffold244	Augustus	exon	92643	92727	.	+	.	ID=Dca24542.1.exon3;Parent=Dca24542.1
scaffold244	Augustus	exon	92819	93028	.	+	.	ID=Dca24542.1.exon4;Parent=Dca24542.1
scaffold244	Augustus	exon	93163	93285	.	+	.	ID=Dca24542.1.exon5;Parent=Dca24542.1
scaffold244	Augustus	exon	93758	93846	.	+	.	ID=Dca24542.1.exon6;Parent=Dca24542.1
scaffold244	Augustus	exon	93931	94000	.	+	.	ID=Dca24542.1.exon7;Parent=Dca24542.1