Carnation DB

Dca24648.1

Annotation

12-exons
f-1
sp|B9N1I7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_579484#unknown#0F0P0C
sp|B9SRD8_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1124470#unknown#0F0P0C
Repeat List (scaffold245)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24648.1	95	438	438	37.67	344	47	2e-82
Target_name	Start	End	Length	Cov(%)
sp\|B9N1I7_POPTR	166	513	703	49.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24648.1	106	435	438	31.96	330	41	4e-56
Target_name	Start	End	Length	Cov(%)
AT3G15390.1	161	490	490	67.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold245	Augus-PASA	mRNA	126919	132421	.	-	.	ID=Dca24648.1;Parent=Dca24648
scaffold245	Augus-PASA	exon	126919	127044	.	-	.	ID=Dca24648.1.exon1;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	127119	127189	.	-	.	ID=Dca24648.1.exon2;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	127294	127391	.	-	.	ID=Dca24648.1.exon3;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	127522	127589	.	-	.	ID=Dca24648.1.exon4;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	128861	128917	.	-	.	ID=Dca24648.1.exon5;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	129249	129334	.	-	.	ID=Dca24648.1.exon6;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	129976	130220	.	-	.	ID=Dca24648.1.exon7;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	130368	130438	.	-	.	ID=Dca24648.1.exon8;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	130929	131006	.	-	.	ID=Dca24648.1.exon9;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	131148	131173	.	-	.	ID=Dca24648.1.exon10;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	131937	132137	.	-	.	ID=Dca24648.1.exon11;Parent=Dca24648.1
scaffold245	Augus-PASA	exon	132232	132421	.	-	.	ID=Dca24648.1.exon12;Parent=Dca24648.1