Dca24851.1
Annotation
- 2-exons
- f-1
- sp|Q10I04_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g37210#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2471)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24851.1 |
1 |
218 |
226 |
56.19 |
218 |
57 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10I04_ORYSJ |
1374 |
1598 |
1759 |
12.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24851.1 |
1 |
76 |
226 |
11.5 |
76 |
35 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1103 |
1178 |
1401 |
5.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2471 |
Augustus |
mRNA |
12899 |
13780 |
. |
- |
. |
ID=Dca24851.1;Parent=Dca24851 |
| scaffold2471 |
Augustus |
exon |
12899 |
13350 |
. |
- |
. |
ID=Dca24851.1.exon1;Parent=Dca24851.1 |
| scaffold2471 |
Augustus |
exon |
13552 |
13780 |
. |
- |
. |
ID=Dca24851.1.exon2;Parent=Dca24851.1 |
