Carnation DB

Dca24924.1

Annotation

12-exons
f-1
sp|B9MXD8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_813422#GO:0005634;GO:0007049;GO:0006281#0F2P1C
AT5G66130.1 | Symbols: ATRAD17, RAD17 | RADIATION SENSITIVE 17 | chr5:26434236-26437091 FORWARD LENGTH=599
Repeat List (scaffold248)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24924.1	2	612	613	54.48	611	54	5e-177
Target_name	Start	End	Length	Cov(%)
sp\|B9MXD8_POPTR	3	612	613	99.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24924.1	11	612	613	50.08	602	51	2e-156
Target_name	Start	End	Length	Cov(%)
AT5G66130.1	6	598	599	98.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold248	Augustus	mRNA	102610	106359	.	+	.	ID=Dca24924.1;Parent=Dca24924
scaffold248	Augustus	exon	102610	102837	.	+	.	ID=Dca24924.1.exon1;Parent=Dca24924.1
scaffold248	Augustus	exon	102983	103040	.	+	.	ID=Dca24924.1.exon2;Parent=Dca24924.1
scaffold248	Augustus	exon	103289	103374	.	+	.	ID=Dca24924.1.exon3;Parent=Dca24924.1
scaffold248	Augustus	exon	103451	103498	.	+	.	ID=Dca24924.1.exon4;Parent=Dca24924.1
scaffold248	Augustus	exon	103614	103667	.	+	.	ID=Dca24924.1.exon5;Parent=Dca24924.1
scaffold248	Augustus	exon	103772	103874	.	+	.	ID=Dca24924.1.exon6;Parent=Dca24924.1
scaffold248	Augustus	exon	104127	104434	.	+	.	ID=Dca24924.1.exon7;Parent=Dca24924.1
scaffold248	Augustus	exon	104576	104924	.	+	.	ID=Dca24924.1.exon8;Parent=Dca24924.1
scaffold248	Augustus	exon	105292	105414	.	+	.	ID=Dca24924.1.exon9;Parent=Dca24924.1
scaffold248	Augustus	exon	105595	105793	.	+	.	ID=Dca24924.1.exon10;Parent=Dca24924.1
scaffold248	Augustus	exon	105888	105948	.	+	.	ID=Dca24924.1.exon11;Parent=Dca24924.1
scaffold248	Augustus	exon	106135	106359	.	+	.	ID=Dca24924.1.exon12;Parent=Dca24924.1