Dca2496.1
Annotation
- 3-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2496.1 |
197 |
1242 |
1246 |
37.8 |
1046 |
42 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
402 |
1500 |
1501 |
73.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2496.1 |
1091 |
1199 |
1246 |
5.13 |
109 |
59 |
9e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
446 |
554 |
1262 |
8.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1086 |
Augustus |
mRNA |
7023 |
11082 |
. |
- |
. |
ID=Dca2496.1;Parent=Dca2496 |
| scaffold1086 |
Augustus |
exon |
7023 |
7491 |
. |
- |
. |
ID=Dca2496.1.exon1;Parent=Dca2496.1 |
| scaffold1086 |
Augustus |
exon |
7690 |
10718 |
. |
- |
. |
ID=Dca2496.1.exon2;Parent=Dca2496.1 |
| scaffold1086 |
Augustus |
exon |
10840 |
11082 |
. |
- |
. |
ID=Dca2496.1.exon3;Parent=Dca2496.1 |
