Dca2502.1
Annotation
- 4-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2502.1 |
8 |
804 |
1153 |
24.45 |
797 |
35 |
6e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
254 |
1075 |
1110 |
74.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2502.1 |
65 |
672 |
1153 |
16.82 |
608 |
31 |
5e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
230 |
856 |
857 |
73.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1086 |
Augustus |
mRNA |
79336 |
83941 |
. |
- |
. |
ID=Dca2502.1;Parent=Dca2502 |
| scaffold1086 |
Augustus |
exon |
79336 |
79519 |
. |
- |
. |
ID=Dca2502.1.exon1;Parent=Dca2502.1 |
| scaffold1086 |
Augustus |
exon |
80054 |
80852 |
. |
- |
. |
ID=Dca2502.1.exon2;Parent=Dca2502.1 |
| scaffold1086 |
Augustus |
exon |
81392 |
82485 |
. |
- |
. |
ID=Dca2502.1.exon3;Parent=Dca2502.1 |
| scaffold1086 |
Augustus |
exon |
82557 |
83941 |
. |
- |
. |
ID=Dca2502.1.exon4;Parent=Dca2502.1 |
