Carnation DB

Dca2528.1

Annotation

6-exons
f-1
sp|Q1KUQ8_9ROSI#Putative uncharacterized protein#Cleome spinosa#unknown#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
AT5G15640.1 | Symbols: | Mitochondrial substrate carrier family protein | chr5:5087590-5089677 FORWARD LENGTH=323
Repeat List (scaffold1088)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2528.1	1	321	321	77.25	321	78	1e-143
Target_name	Start	End	Length	Cov(%)
sp\|Q1KUQ8_9ROSI	1	320	321	99.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2528.1	1	321	321	76.32	321	76	3e-141
Target_name	Start	End	Length	Cov(%)
AT5G15640.1	1	322	323	99.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1088	Augus-PASA	mRNA	11079	15526	.	-	.	ID=Dca2528.1;Parent=Dca2528
scaffold1088	Augus-PASA	exon	11079	11101	.	-	.	ID=Dca2528.1.exon1;Parent=Dca2528.1
scaffold1088	Augus-PASA	exon	11278	11434	.	-	.	ID=Dca2528.1.exon2;Parent=Dca2528.1
scaffold1088	Augus-PASA	exon	11742	11889	.	-	.	ID=Dca2528.1.exon3;Parent=Dca2528.1
scaffold1088	Augus-PASA	exon	12421	12617	.	-	.	ID=Dca2528.1.exon4;Parent=Dca2528.1
scaffold1088	Augus-PASA	exon	13381	13762	.	-	.	ID=Dca2528.1.exon5;Parent=Dca2528.1
scaffold1088	Augus-PASA	exon	15468	15526	.	-	.	ID=Dca2528.1.exon6;Parent=Dca2528.1