Dca25551.1
Annotation
- 4-exons
- f-1
- sp|F6HIC3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g00800#GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P0C
- sp|B9SFQ7_RICCO#DNA repair helicase rad5,16, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1224050#GO:0005524;GO:0003677;GO:0004386;GO:0016740;GO:0008270#5F0P0C
- Repeat List (scaffold2535)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25551.1 |
1 |
495 |
511 |
45.79 |
495 |
45 |
5e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HIC3_VITVI |
1 |
508 |
936 |
54.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25551.1 |
141 |
495 |
511 |
33.46 |
355 |
48 |
5e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G05120.1 |
77 |
406 |
833 |
39.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2535 |
Augustus |
mRNA |
29713 |
32974 |
. |
- |
. |
ID=Dca25551.1;Parent=Dca25551 |
| scaffold2535 |
Augustus |
exon |
29713 |
29898 |
. |
- |
. |
ID=Dca25551.1.exon1;Parent=Dca25551.1 |
| scaffold2535 |
Augustus |
exon |
30608 |
31800 |
. |
- |
. |
ID=Dca25551.1.exon2;Parent=Dca25551.1 |
| scaffold2535 |
Augustus |
exon |
31892 |
32002 |
. |
- |
. |
ID=Dca25551.1.exon3;Parent=Dca25551.1 |
| scaffold2535 |
Augustus |
exon |
32929 |
32974 |
. |
- |
. |
ID=Dca25551.1.exon4;Parent=Dca25551.1 |
