Dca25993.1
Annotation
- 3-exons
- f-1
- sp|Q2A9E0_BRAOL#Putative uncharacterized protein#Brassica oleracea (Wild cabbage)#ORFNames=31.t00030#unknown#0F0P0C
- sp|Q2QZU2_ORYSJ#AT hook motif-containing protein, putative, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g44830#GO:0005524;GO:0004386#2F0P0C
- Repeat List (scaffold2586)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25993.1 |
6 |
169 |
309 |
23.94 |
164 |
45 |
4e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2A9E0_BRAOL |
230 |
390 |
1471 |
10.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25993.1 |
22 |
134 |
309 |
18.44 |
113 |
51 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0523100-01 |
196 |
308 |
313 |
36.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2586 |
Augustus |
mRNA |
9507 |
11955 |
. |
- |
. |
ID=Dca25993.1;Parent=Dca25993 |
| scaffold2586 |
Augustus |
exon |
9507 |
9901 |
. |
- |
. |
ID=Dca25993.1.exon1;Parent=Dca25993.1 |
| scaffold2586 |
Augustus |
exon |
10401 |
10903 |
. |
- |
. |
ID=Dca25993.1.exon2;Parent=Dca25993.1 |
| scaffold2586 |
Augustus |
exon |
11924 |
11955 |
. |
- |
. |
ID=Dca25993.1.exon3;Parent=Dca25993.1 |
