Carnation DB

Dca2612.1

Annotation

7-exons
f-1
sp|B9N9M7_POPTR#D-tyrosyl-tRNA(Tyr) deacylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828633#GO:0005737;GO:0016788;GO:0019478#1F1P1C
Repeat List (scaffold1090)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2612.1	26	195	195	68.2	170	76	1e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9N9M7_POPTR	16	190	201	87.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2612.1	43	195	195	61.02	153	78	9e-69
Target_name	Start	End	Length	Cov(%)
AT4G18460.1	1	153	153	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1090	Augus-PASA	mRNA	63690	65951	.	-	.	ID=Dca2612.1;Parent=Dca2612
scaffold1090	Augus-PASA	exon	63690	63752	.	-	.	ID=Dca2612.1.exon1;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	63895	63920	.	-	.	ID=Dca2612.1.exon2;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	64253	64393	.	-	.	ID=Dca2612.1.exon3;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	64477	64507	.	-	.	ID=Dca2612.1.exon4;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	64669	64735	.	-	.	ID=Dca2612.1.exon5;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	65585	65676	.	-	.	ID=Dca2612.1.exon6;Parent=Dca2612.1
scaffold1090	Augus-PASA	exon	65784	65951	.	-	.	ID=Dca2612.1.exon7;Parent=Dca2612.1