Carnation DB

Dca26182.1

Annotation

9-exons
f-1
sp|B9N1Z2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580758#GO:0016021#0F0P1C
Os01t0604700-01 Similar to cDNA clone:001-043-A08, full insert sequence.
Repeat List (scaffold26)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26182.1	1	348	348	72.41	348	73	2e-145
Target_name	Start	End	Length	Cov(%)
sp\|B9N1Z2_POPTR	1	345	345	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26182.1	1	348	348	72.12	348	72	8e-142
Target_name	Start	End	Length	Cov(%)
AT3G02420.1	1	348	348	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold26	Augus-PASA	mRNA	430534	433595	.	+	.	ID=Dca26182.1;Parent=Dca26182
scaffold26	Augus-PASA	exon	430534	430710	.	+	.	ID=Dca26182.1.exon1;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	431709	431826	.	+	.	ID=Dca26182.1.exon2;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	431915	432027	.	+	.	ID=Dca26182.1.exon3;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	432253	432378	.	+	.	ID=Dca26182.1.exon4;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	432476	432596	.	+	.	ID=Dca26182.1.exon5;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	432684	432768	.	+	.	ID=Dca26182.1.exon6;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	433044	433157	.	+	.	ID=Dca26182.1.exon7;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	433248	433287	.	+	.	ID=Dca26182.1.exon8;Parent=Dca26182.1
scaffold26	Augus-PASA	exon	433443	433595	.	+	.	ID=Dca26182.1.exon9;Parent=Dca26182.1