Dca26289.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2609)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26289.1 |
231 |
416 |
416 |
30.52 |
186 |
69 |
1e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
131 |
316 |
964 |
19.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca26289.1 |
234 |
416 |
416 |
20.19 |
183 |
46 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
548 |
731 |
1428 |
12.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2609 |
Augustus |
mRNA |
43200 |
45716 |
. |
+ |
. |
ID=Dca26289.1;Parent=Dca26289 |
| scaffold2609 |
Augustus |
exon |
43200 |
43527 |
. |
+ |
. |
ID=Dca26289.1.exon1;Parent=Dca26289.1 |
| scaffold2609 |
Augustus |
exon |
43617 |
43979 |
. |
+ |
. |
ID=Dca26289.1.exon2;Parent=Dca26289.1 |
| scaffold2609 |
Augustus |
exon |
45157 |
45716 |
. |
+ |
. |
ID=Dca26289.1.exon3;Parent=Dca26289.1 |
