Carnation DB

Dca26302.1

Annotation

5-exons
f-1
sp|B9INC6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_736748#GO:0005524;GO:0006457#1F1P0C
Os02t0781400-02 Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10).
Repeat List (scaffold261)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26302.1	17	107	162	21.6	91	38	5e-10
Target_name	Start	End	Length	Cov(%)
sp\|B9INC6_POPTR	165	257	258	36.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26302.1	17	107	162	24.07	91	42	1e-13
Target_name	Start	End	Length	Cov(%)
Os02t0781400-02	162	254	256	36.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold261	Augustus	mRNA	49558	50749	.	-	.	ID=Dca26302.1;Parent=Dca26302
scaffold261	Augustus	exon	49558	49635	.	-	.	ID=Dca26302.1.exon1;Parent=Dca26302.1
scaffold261	Augustus	exon	49868	49945	.	-	.	ID=Dca26302.1.exon2;Parent=Dca26302.1
scaffold261	Augustus	exon	50030	50143	.	-	.	ID=Dca26302.1.exon3;Parent=Dca26302.1
scaffold261	Augustus	exon	50244	50423	.	-	.	ID=Dca26302.1.exon4;Parent=Dca26302.1
scaffold261	Augustus	exon	50711	50749	.	-	.	ID=Dca26302.1.exon5;Parent=Dca26302.1