Carnation DB

Dca26316.1

Annotation

7-exons
f-1
sp|B9HU66_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_230673#unknown#0F0P0C
AT1G10600.1 | Symbols: AMSH2 | associated molecule with the SH3 domain of STAM 2 | chr1:3503765-3505190 FORWARD LENGTH=223
Repeat List (scaffold2610)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26316.1	6	219	219	64.84	214	66	3e-79
Target_name	Start	End	Length	Cov(%)
sp\|B9HU66_POPTR	6	221	221	97.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26316.1	25	219	219	60.27	195	68	1e-79
Target_name	Start	End	Length	Cov(%)
AT1G10600.1	29	223	223	87.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2610	Augustus	mRNA	19793	21795	.	-	.	ID=Dca26316.1;Parent=Dca26316
scaffold2610	Augustus	exon	19793	19967	.	-	.	ID=Dca26316.1.exon1;Parent=Dca26316.1
scaffold2610	Augustus	exon	20595	20647	.	-	.	ID=Dca26316.1.exon2;Parent=Dca26316.1
scaffold2610	Augustus	exon	20907	20969	.	-	.	ID=Dca26316.1.exon3;Parent=Dca26316.1
scaffold2610	Augustus	exon	21167	21241	.	-	.	ID=Dca26316.1.exon4;Parent=Dca26316.1
scaffold2610	Augustus	exon	21340	21402	.	-	.	ID=Dca26316.1.exon5;Parent=Dca26316.1
scaffold2610	Augustus	exon	21483	21572	.	-	.	ID=Dca26316.1.exon6;Parent=Dca26316.1
scaffold2610	Augustus	exon	21655	21795	.	-	.	ID=Dca26316.1.exon7;Parent=Dca26316.1