Carnation DB

Dca26396.1

Annotation

12-exons
f-1
sp|D7U4Q7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04010#unknown#0F0P0C
AT4G35360.1 | Symbols: | Uncharacterised conserved protein (UCP030210) | chr4:16812303-16814656 REVERSE LENGTH=367
Repeat List (scaffold262)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26396.1	1	365	367	83.37	365	84	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U4Q7_VITVI	1	365	367	99.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca26396.1	1	365	367	80.1	365	81	1e-177
Target_name	Start	End	Length	Cov(%)
AT4G35360.1	1	365	367	99.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold262	Augus-PASA	mRNA	56162	60559	.	+	.	ID=Dca26396.1;Parent=Dca26396
scaffold262	Augus-PASA	exon	56162	56331	.	+	.	ID=Dca26396.1.exon1;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	57386	57451	.	+	.	ID=Dca26396.1.exon2;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	58069	58135	.	+	.	ID=Dca26396.1.exon3;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	58227	58295	.	+	.	ID=Dca26396.1.exon4;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	58410	58550	.	+	.	ID=Dca26396.1.exon5;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	58718	58846	.	+	.	ID=Dca26396.1.exon6;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	58974	59060	.	+	.	ID=Dca26396.1.exon7;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	59494	59568	.	+	.	ID=Dca26396.1.exon8;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	59647	59724	.	+	.	ID=Dca26396.1.exon9;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	59821	59898	.	+	.	ID=Dca26396.1.exon10;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	60307	60369	.	+	.	ID=Dca26396.1.exon11;Parent=Dca26396.1
scaffold262	Augus-PASA	exon	60479	60559	.	+	.	ID=Dca26396.1.exon12;Parent=Dca26396.1