Carnation DB

Dca27024.1

Annotation

12-exons
f-1
sp|B9RMA3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1078940#unknown#0F0P0C
AT1G27430.1 | Symbols: | GYF domain-containing protein | chr1:9521045-9526928 REVERSE LENGTH=1492
Repeat List (scaffold269)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27024.1	4	170	178	38.2	167	38	1e-13
Target_name	Start	End	Length	Cov(%)
sp\|B9GF55_POPTR	86	266	1576	11.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27024.1	7	1578	1578	34.91	1572	33	6e-171
Target_name	Start	End	Length	Cov(%)
AT1G27430.1	6	1491	1492	99.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold269	Augustus	mRNA	109166	117092	.	+	.	ID=Dca27024.1;Parent=Dca27024
scaffold269	Augustus	exon	109166	109223	.	+	.	ID=Dca27024.1.exon1;Parent=Dca27024.1
scaffold269	Augustus	exon	109700	109747	.	+	.	ID=Dca27024.1.exon2;Parent=Dca27024.1
scaffold269	Augustus	exon	109845	109915	.	+	.	ID=Dca27024.1.exon3;Parent=Dca27024.1
scaffold269	Augustus	exon	110146	110238	.	+	.	ID=Dca27024.1.exon4;Parent=Dca27024.1
scaffold269	Augustus	exon	110866	111708	.	+	.	ID=Dca27024.1.exon5;Parent=Dca27024.1
scaffold269	Augustus	exon	111867	111960	.	+	.	ID=Dca27024.1.exon6;Parent=Dca27024.1
scaffold269	Augustus	exon	112048	112155	.	+	.	ID=Dca27024.1.exon7;Parent=Dca27024.1
scaffold269	Augustus	exon	112267	113004	.	+	.	ID=Dca27024.1.exon8;Parent=Dca27024.1
scaffold269	Augustus	exon	113096	115261	.	+	.	ID=Dca27024.1.exon9;Parent=Dca27024.1
scaffold269	Augustus	exon	115346	115403	.	+	.	ID=Dca27024.1.exon10;Parent=Dca27024.1
scaffold269	Augustus	exon	115712	115863	.	+	.	ID=Dca27024.1.exon11;Parent=Dca27024.1
scaffold269	Augustus	exon	116785	117092	.	+	.	ID=Dca27024.1.exon12;Parent=Dca27024.1