Carnation DB

Dca2719.1

Annotation

6-exons
f-1
sp|F6HNI2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g03980#GO:0005674;GO:0005524;GO:0003824;GO:0006367#2F1P1C
sp|B9T7T1_RICCO#Transcription initiation factor IIF subunit beta, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0179570#GO:0005674;GO:0005524;GO:0003824;GO:0003743;GO:0006367#3F1P1C
Repeat List (scaffold1096)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2719.1	1	248	248	66.12	248	64	1e-83
Target_name	Start	End	Length	Cov(%)
sp\|F6HNI2_VITVI	1	249	257	96.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2719.1	1	248	248	57.66	248	56	6e-77
Target_name	Start	End	Length	Cov(%)
AT3G52270.1	13	265	269	94.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1096	Augus-PASA	mRNA	18213	21993	.	-	.	ID=Dca2719.1;Parent=Dca2719
scaffold1096	Augus-PASA	exon	18213	18308	.	-	.	ID=Dca2719.1.exon1;Parent=Dca2719.1
scaffold1096	Augus-PASA	exon	18684	18830	.	-	.	ID=Dca2719.1.exon2;Parent=Dca2719.1
scaffold1096	Augus-PASA	exon	18948	19001	.	-	.	ID=Dca2719.1.exon3;Parent=Dca2719.1
scaffold1096	Augus-PASA	exon	19103	19233	.	-	.	ID=Dca2719.1.exon4;Parent=Dca2719.1
scaffold1096	Augus-PASA	exon	19647	19752	.	-	.	ID=Dca2719.1.exon5;Parent=Dca2719.1
scaffold1096	Augus-PASA	exon	21781	21993	.	-	.	ID=Dca2719.1.exon6;Parent=Dca2719.1