Carnation DB

Dca27283.1

Annotation

6-exons
f-1
sp|A5AWA7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002893#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2712)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27283.1	2	1259	1282	43.6	1258	39	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AWA7_VITVI	670	2027	2136	63.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27283.1	698	1029	1282	9.51	332	33	6e-58
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	70	435	591	61.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2712	Augustus	mRNA	37341	42111	.	-	.	ID=Dca27283.1;Parent=Dca27283
scaffold2712	Augustus	exon	37341	37534	.	-	.	ID=Dca27283.1.exon1;Parent=Dca27283.1
scaffold2712	Augustus	exon	37823	38066	.	-	.	ID=Dca27283.1.exon2;Parent=Dca27283.1
scaffold2712	Augustus	exon	38391	39386	.	-	.	ID=Dca27283.1.exon3;Parent=Dca27283.1
scaffold2712	Augustus	exon	39501	40427	.	-	.	ID=Dca27283.1.exon4;Parent=Dca27283.1
scaffold2712	Augustus	exon	40532	41819	.	-	.	ID=Dca27283.1.exon5;Parent=Dca27283.1
scaffold2712	Augustus	exon	41912	42111	.	-	.	ID=Dca27283.1.exon6;Parent=Dca27283.1