Dca2729.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10960)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2729.1 |
31 |
443 |
466 |
29.82 |
413 |
30 |
3e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
11 |
481 |
1501 |
31.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2729.1 |
60 |
173 |
466 |
7.93 |
114 |
33 |
5e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
84 |
198 |
296 |
38.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10960 |
Augustus |
mRNA |
4329 |
5825 |
. |
+ |
. |
ID=Dca2729.1;Parent=Dca2729 |
| scaffold10960 |
Augustus |
exon |
4329 |
4853 |
. |
+ |
. |
ID=Dca2729.1.exon1;Parent=Dca2729.1 |
| scaffold10960 |
Augustus |
exon |
4950 |
5825 |
. |
+ |
. |
ID=Dca2729.1.exon2;Parent=Dca2729.1 |
