Carnation DB

Dca2739.1

Annotation

6-exons
f-1
sp|D7KTA4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_895494#GO:0005507;GO:0016491#2F0P0C
AT1G76160.1 | Symbols: sks5 | SKU5 similar 5 | chr1:28578211-28581020 REVERSE LENGTH=541
Repeat List (scaffold1097)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2739.1	5	535	536	82.08	531	83	0
Target_name	Start	End	Length	Cov(%)
sp\|D7KTA4_ARALL	12	541	541	97.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2739.1	5	535	536	80.97	531	82	0
Target_name	Start	End	Length	Cov(%)
AT1G76160.1	12	541	541	97.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1097	Augustus	mRNA	58245	61396	.	+	.	ID=Dca2739.1;Parent=Dca2739
scaffold1097	Augustus	exon	58245	58367	.	+	.	ID=Dca2739.1.exon1;Parent=Dca2739.1
scaffold1097	Augustus	exon	58461	58570	.	+	.	ID=Dca2739.1.exon2;Parent=Dca2739.1
scaffold1097	Augustus	exon	59274	59544	.	+	.	ID=Dca2739.1.exon3;Parent=Dca2739.1
scaffold1097	Augustus	exon	59930	60741	.	+	.	ID=Dca2739.1.exon4;Parent=Dca2739.1
scaffold1097	Augustus	exon	60986	61064	.	+	.	ID=Dca2739.1.exon5;Parent=Dca2739.1
scaffold1097	Augustus	exon	61181	61396	.	+	.	ID=Dca2739.1.exon6;Parent=Dca2739.1