Dca2742.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10970)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2742.1 |
2 |
236 |
509 |
32.61 |
235 |
71 |
2e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
770 |
1003 |
1501 |
15.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2742.1 |
2 |
205 |
509 |
16.69 |
204 |
42 |
3e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
796 |
998 |
1539 |
13.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10970 |
Augustus |
mRNA |
443 |
4593 |
. |
- |
. |
ID=Dca2742.1;Parent=Dca2742 |
| scaffold10970 |
Augustus |
exon |
443 |
536 |
. |
- |
. |
ID=Dca2742.1.exon1;Parent=Dca2742.1 |
| scaffold10970 |
Augustus |
exon |
676 |
803 |
. |
- |
. |
ID=Dca2742.1.exon2;Parent=Dca2742.1 |
| scaffold10970 |
Augustus |
exon |
933 |
1475 |
. |
- |
. |
ID=Dca2742.1.exon3;Parent=Dca2742.1 |
| scaffold10970 |
Augustus |
exon |
3829 |
4593 |
. |
- |
. |
ID=Dca2742.1.exon4;Parent=Dca2742.1 |
