Dca27429.1
Annotation
- 4-exons
- f-1
- sp|B9HDK6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561006#GO:0016881;GO:0005524#2F0P0C
- AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 | chr5:21632802-21633989 REVERSE LENGTH=148
- Repeat List (scaffold273)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27429.1 |
1 |
148 |
148 |
99.32 |
148 |
99 |
3e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HDK6_POPTR |
76 |
223 |
223 |
66.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27429.1 |
1 |
148 |
148 |
97.29 |
148 |
98 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G53300.1 |
1 |
148 |
148 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold273 |
Augus-PASA |
mRNA |
54486 |
56090 |
. |
+ |
. |
ID=Dca27429.1;Parent=Dca27429 |
| scaffold273 |
Augus-PASA |
exon |
54486 |
54555 |
. |
+ |
. |
ID=Dca27429.1.exon1;Parent=Dca27429.1 |
| scaffold273 |
Augus-PASA |
exon |
55384 |
55511 |
. |
+ |
. |
ID=Dca27429.1.exon2;Parent=Dca27429.1 |
| scaffold273 |
Augus-PASA |
exon |
55740 |
55844 |
. |
+ |
. |
ID=Dca27429.1.exon3;Parent=Dca27429.1 |
| scaffold273 |
Augus-PASA |
exon |
55947 |
56090 |
. |
+ |
. |
ID=Dca27429.1.exon4;Parent=Dca27429.1 |
