Carnation DB

Dca2745.1

Annotation

5-exons
f-1
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold10972)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2745.1	140	638	638	36.83	499	45	2e-118
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	141	666	1501	35.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2745.1	348	630	638	15.04	283	34	1e-42
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	61	347	707	40.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10972	Augustus	mRNA	13289	16414	.	+	.	ID=Dca2745.1;Parent=Dca2745
scaffold10972	Augustus	exon	13289	13408	.	+	.	ID=Dca2745.1.exon1;Parent=Dca2745.1
scaffold10972	Augustus	exon	13677	13733	.	+	.	ID=Dca2745.1.exon2;Parent=Dca2745.1
scaffold10972	Augustus	exon	13832	13843	.	+	.	ID=Dca2745.1.exon3;Parent=Dca2745.1
scaffold10972	Augustus	exon	14489	14716	.	+	.	ID=Dca2745.1.exon4;Parent=Dca2745.1
scaffold10972	Augustus	exon	14915	16414	.	+	.	ID=Dca2745.1.exon5;Parent=Dca2745.1