Dca27509.1
Annotation
- 4-exons
- f-1
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold274)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27509.1 |
74 |
238 |
274 |
27.73 |
165 |
44 |
8e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L4J8_SOLDE |
897 |
1065 |
1065 |
15.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27509.1 |
4 |
81 |
274 |
13.5 |
78 |
46 |
5e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1016 |
1096 |
1401 |
5.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold274 |
Augustus |
mRNA |
108542 |
110418 |
. |
- |
. |
ID=Dca27509.1;Parent=Dca27509 |
| scaffold274 |
Augustus |
exon |
108542 |
108643 |
. |
- |
. |
ID=Dca27509.1.exon1;Parent=Dca27509.1 |
| scaffold274 |
Augustus |
exon |
109251 |
109485 |
. |
- |
. |
ID=Dca27509.1.exon2;Parent=Dca27509.1 |
| scaffold274 |
Augustus |
exon |
109769 |
110027 |
. |
- |
. |
ID=Dca27509.1.exon3;Parent=Dca27509.1 |
| scaffold274 |
Augustus |
exon |
110190 |
110418 |
. |
- |
. |
ID=Dca27509.1.exon4;Parent=Dca27509.1 |
