Dca27585.1
Annotation
- 3-exons
- f-1
- sp|A5ALU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001308#GO:0005622;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2748)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27585.1 |
570 |
1363 |
1538 |
21.19 |
794 |
39 |
1e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ALU1_VITVI |
616 |
1438 |
1901 |
43.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27585.1 |
1118 |
1282 |
1538 |
3.51 |
165 |
33 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
6 |
169 |
591 |
27.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2748 |
Augustus |
mRNA |
50030 |
59420 |
. |
- |
. |
ID=Dca27585.1;Parent=Dca27585 |
| scaffold2748 |
Augustus |
exon |
50030 |
50797 |
. |
- |
. |
ID=Dca27585.1.exon1;Parent=Dca27585.1 |
| scaffold2748 |
Augustus |
exon |
55484 |
59121 |
. |
- |
. |
ID=Dca27585.1.exon2;Parent=Dca27585.1 |
| scaffold2748 |
Augustus |
exon |
59210 |
59420 |
. |
- |
. |
ID=Dca27585.1.exon3;Parent=Dca27585.1 |
