Carnation DB

Dca27591.1

Annotation

5-exons
f-1
sp|B9HZJ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_889019#GO:0005525;GO:0051020;GO:0005085#3F0P0C
AT4G16340.1 | Symbols: SPK1 | guanyl-nucleotide exchange factors;GTPase binding;GTP binding | chr4:9228773-9241060 REVERSE LENGTH=1830
Repeat List (scaffold2749)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27591.1	4	525	525	84.38	522	85	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HZJ9_POPTR	1105	1626	1848	28.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27591.1	4	525	525	81.71	522	83	0
Target_name	Start	End	Length	Cov(%)
AT4G16340.1	1088	1608	1830	28.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2749	Augustus	mRNA	27561	31691	.	+	.	ID=Dca27591.1;Parent=Dca27591
scaffold2749	Augustus	exon	27561	27707	.	+	.	ID=Dca27591.1.exon1;Parent=Dca27591.1
scaffold2749	Augustus	exon	29704	30051	.	+	.	ID=Dca27591.1.exon2;Parent=Dca27591.1
scaffold2749	Augustus	exon	30136	30468	.	+	.	ID=Dca27591.1.exon3;Parent=Dca27591.1
scaffold2749	Augustus	exon	30567	30752	.	+	.	ID=Dca27591.1.exon4;Parent=Dca27591.1
scaffold2749	Augustus	exon	31128	31691	.	+	.	ID=Dca27591.1.exon5;Parent=Dca27591.1