Dca27608.1
Annotation
- 4-exons
- f-1
- sp|A5AL70_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_024895#GO:0005488#1F0P0C
- AT3G51280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:19037229-19038781 FORWARD LENGTH=430
- Repeat List (scaffold275)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27608.1 |
5 |
357 |
388 |
53.86 |
353 |
55 |
4e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AL70_VITVI |
1 |
382 |
402 |
95.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27608.1 |
183 |
385 |
388 |
21.64 |
203 |
41 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G51280.1 |
253 |
427 |
430 |
40.69 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold275 |
Augustus |
mRNA |
107519 |
109235 |
. |
+ |
. |
ID=Dca27608.1;Parent=Dca27608 |
| scaffold275 |
Augustus |
exon |
107519 |
107695 |
. |
+ |
. |
ID=Dca27608.1.exon1;Parent=Dca27608.1 |
| scaffold275 |
Augustus |
exon |
107787 |
107999 |
. |
+ |
. |
ID=Dca27608.1.exon2;Parent=Dca27608.1 |
| scaffold275 |
Augustus |
exon |
108124 |
108279 |
. |
+ |
. |
ID=Dca27608.1.exon3;Parent=Dca27608.1 |
| scaffold275 |
Augustus |
exon |
108615 |
109235 |
. |
+ |
. |
ID=Dca27608.1.exon4;Parent=Dca27608.1 |
