Dca27627.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2752)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27627.1 |
1 |
453 |
480 |
57.7 |
453 |
58 |
2e-152
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1038 |
1521 |
1553 |
31.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27627.1 |
18 |
464 |
480 |
31.45 |
447 |
32 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1021 |
1485 |
1539 |
30.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2752 |
Augustus |
mRNA |
7323 |
9609 |
. |
- |
. |
ID=Dca27627.1;Parent=Dca27627 |
| scaffold2752 |
Augustus |
exon |
7323 |
7399 |
. |
- |
. |
ID=Dca27627.1.exon1;Parent=Dca27627.1 |
| scaffold2752 |
Augustus |
exon |
8157 |
8710 |
. |
- |
. |
ID=Dca27627.1.exon2;Parent=Dca27627.1 |
| scaffold2752 |
Augustus |
exon |
8798 |
9609 |
. |
- |
. |
ID=Dca27627.1.exon3;Parent=Dca27627.1 |
