Dca27672.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2757)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27672.1 |
1 |
562 |
708 |
42.93 |
562 |
54 |
3e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
236 |
747 |
1717 |
29.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27672.1 |
315 |
407 |
708 |
4.8 |
93 |
37 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2757 |
Augustus |
mRNA |
6486 |
10755 |
. |
+ |
. |
ID=Dca27672.1;Parent=Dca27672 |
| scaffold2757 |
Augustus |
exon |
6486 |
8115 |
. |
+ |
. |
ID=Dca27672.1.exon1;Parent=Dca27672.1 |
| scaffold2757 |
Augustus |
exon |
8192 |
8381 |
. |
+ |
. |
ID=Dca27672.1.exon2;Parent=Dca27672.1 |
| scaffold2757 |
Augustus |
exon |
10449 |
10755 |
. |
+ |
. |
ID=Dca27672.1.exon3;Parent=Dca27672.1 |
