Carnation DB

Dca27693.1

Annotation

14-exons
f-1
sp|D7TCR2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0080g00880#GO:0016021;GO:0016485;GO:0009966#0F2P1C
AT3G44330.1 | Symbols: | INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr3:16006754-16010671 FORWARD LENGTH=565
Repeat List (scaffold276)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27693.1	1	557	557	77.55	557	77	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TCR2_VITVI	1	563	563	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27693.1	13	555	557	71.99	543	74	0
Target_name	Start	End	Length	Cov(%)
AT3G44330.1	22	563	565	95.92

seqname	source	feature	start	end	score	strand	frame	group
scaffold276	Augustus	mRNA	76323	82196	.	+	.	ID=Dca27693.1;Parent=Dca27693
scaffold276	Augustus	exon	76323	76584	.	+	.	ID=Dca27693.1.exon1;Parent=Dca27693.1
scaffold276	Augustus	exon	78023	78189	.	+	.	ID=Dca27693.1.exon2;Parent=Dca27693.1
scaffold276	Augustus	exon	78650	78753	.	+	.	ID=Dca27693.1.exon3;Parent=Dca27693.1
scaffold276	Augustus	exon	79247	79313	.	+	.	ID=Dca27693.1.exon4;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	79591	79683	.	+	.	ID=Dca27693.1.exon5;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	79771	79935	.	+	.	ID=Dca27693.1.exon6;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	80061	80201	.	+	.	ID=Dca27693.1.exon7;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	80299	80376	.	+	.	ID=Dca27693.1.exon8;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	80515	80627	.	+	.	ID=Dca27693.1.exon9;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	80735	80795	.	+	.	ID=Dca27693.1.exon10;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	81184	81351	.	+	.	ID=Dca27693.1.exon11;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	81522	81623	.	+	.	ID=Dca27693.1.exon12;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	81741	81830	.	+	.	ID=Dca27693.1.exon13;Parent=Dca27693.1
scaffold276	Augus-PASA	exon	82134	82196	.	+	.	ID=Dca27693.1.exon14;Parent=Dca27693.1