Dca27772.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold2767)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27772.1 |
7 |
653 |
763 |
39.31 |
647 |
42 |
6e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
727 |
1717 |
41.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca27772.1 |
418 |
545 |
763 |
5.5 |
128 |
33 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
76 |
189 |
192 |
59.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2767 |
Augustus |
mRNA |
23151 |
25597 |
. |
- |
. |
ID=Dca27772.1;Parent=Dca27772 |
| scaffold2767 |
Augustus |
exon |
23151 |
23765 |
. |
- |
. |
ID=Dca27772.1.exon1;Parent=Dca27772.1 |
| scaffold2767 |
Augustus |
exon |
23841 |
25041 |
. |
- |
. |
ID=Dca27772.1.exon2;Parent=Dca27772.1 |
| scaffold2767 |
Augustus |
exon |
25122 |
25597 |
. |
- |
. |
ID=Dca27772.1.exon3;Parent=Dca27772.1 |
