Carnation DB

Dca2782.1

Annotation

8-exons
f-1
sp|F6H906_VITVI#Serine hydroxymethyltransferase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0034g02380#GO:0004372;GO:0030170;GO:0006544;GO:0006563;GO:0006730#2F3P0C
Repeat List (scaffold10993)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2782.1	555	770	847	20.66	216	82	6e-103
Target_name	Start	End	Length	Cov(%)
sp\|F6H906_VITVI	334	549	577	37.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2782.1	555	772	847	17.7	218	69	2e-89
Target_name	Start	End	Length	Cov(%)
AT1G22020.1	356	573	599	36.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10993	Augustus	mRNA	6765	12229	.	-	.	ID=Dca2782.1;Parent=Dca2782
scaffold10993	Augustus	exon	6765	7000	.	-	.	ID=Dca2782.1.exon1;Parent=Dca2782.1
scaffold10993	Augustus	exon	7105	7239	.	-	.	ID=Dca2782.1.exon2;Parent=Dca2782.1
scaffold10993	Augustus	exon	7359	7460	.	-	.	ID=Dca2782.1.exon3;Parent=Dca2782.1
scaffold10993	Augustus	exon	8100	8505	.	-	.	ID=Dca2782.1.exon4;Parent=Dca2782.1
scaffold10993	Augustus	exon	9223	9269	.	-	.	ID=Dca2782.1.exon5;Parent=Dca2782.1
scaffold10993	Augustus	exon	9413	9514	.	-	.	ID=Dca2782.1.exon6;Parent=Dca2782.1
scaffold10993	Augustus	exon	10176	10581	.	-	.	ID=Dca2782.1.exon7;Parent=Dca2782.1
scaffold10993	Augustus	exon	11120	12229	.	-	.	ID=Dca2782.1.exon8;Parent=Dca2782.1