Carnation DB

Dca27985.1

Annotation

5-exons
f-1
sp|F6HFH8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04970#unknown#0F0P0C
Os11t0610700-01 WD40 repeat-like domain containing protein.
Repeat List (scaffold279)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27985.1	21	143	172	41.86	123	58	4e-31
Target_name	Start	End	Length	Cov(%)
sp\|F6HFH8_VITVI	52	176	394	31.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27985.1	44	143	172	30.81	100	50	4e-23
Target_name	Start	End	Length	Cov(%)
Os11t0610700-01	73	180	405	26.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold279	Augustus	mRNA	153597	157005	.	-	.	ID=Dca27985.1;Parent=Dca27985
scaffold279	Augustus	exon	153597	153686	.	-	.	ID=Dca27985.1.exon1;Parent=Dca27985.1
scaffold279	Augustus	exon	154827	154968	.	-	.	ID=Dca27985.1.exon2;Parent=Dca27985.1
scaffold279	Augustus	exon	155332	155426	.	-	.	ID=Dca27985.1.exon3;Parent=Dca27985.1
scaffold279	Augustus	exon	155988	156171	.	-	.	ID=Dca27985.1.exon4;Parent=Dca27985.1
scaffold279	Augustus	exon	156998	157005	.	-	.	ID=Dca27985.1.exon5;Parent=Dca27985.1