Carnation DB

Dca27999.1

Annotation

5-exons
f-1
sp|F6GZA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0405g00040#GO:0016021#0F0P1C
AT5G47530.1 | Symbols: | Auxin-responsive family protein | chr5:19281471-19282870 FORWARD LENGTH=395
Repeat List (scaffold2792)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27999.1	11	376	466	48.71	366	62	4e-131
Target_name	Start	End	Length	Cov(%)
sp\|F6GZA8_VITVI	4	372	396	93.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca27999.1	20	376	466	43.13	357	56	4e-120
Target_name	Start	End	Length	Cov(%)
AT5G47530.1	16	375	395	91.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2792	Augustus	mRNA	24525	36003	.	-	.	ID=Dca27999.1;Parent=Dca27999
scaffold2792	Augustus	exon	24525	24778	.	-	.	ID=Dca27999.1.exon1;Parent=Dca27999.1
scaffold2792	Augustus	exon	25548	25809	.	-	.	ID=Dca27999.1.exon2;Parent=Dca27999.1
scaffold2792	Augustus	exon	29132	29386	.	-	.	ID=Dca27999.1.exon3;Parent=Dca27999.1
scaffold2792	Augus-PASA	exon	31420	31656	.	-	.	ID=Dca27999.1.exon4;Parent=Dca27999.1
scaffold2792	Augus-PASA	exon	35611	36003	.	-	.	ID=Dca27999.1.exon5;Parent=Dca27999.1