Carnation DB

Dca28094.1

Annotation

8-exons
f-1
sp|D7SQC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00660#GO:0030246;GO:0016853;GO:0005975#2F1P0C
Os04t0658000-02 Similar to Possible apospory-associated like protein.
Repeat List (scaffold28)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28094.1	15	317	319	81.19	303	85	2e-156
Target_name	Start	End	Length	Cov(%)
sp\|D7SQC7_VITVI	6	312	314	97.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca28094.1	16	317	319	77.11	302	81	3e-145
Target_name	Start	End	Length	Cov(%)
Os04t0658000-02	29	334	345	88.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold28	Augus-PASA	mRNA	409087	413724	.	+	.	ID=Dca28094.1;Parent=Dca28094
scaffold28	Augus-PASA	exon	409087	409206	.	+	.	ID=Dca28094.1.exon1;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	410732	410806	.	+	.	ID=Dca28094.1.exon2;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	411575	411631	.	+	.	ID=Dca28094.1.exon3;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	411728	411882	.	+	.	ID=Dca28094.1.exon4;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	411979	412113	.	+	.	ID=Dca28094.1.exon5;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	412692	412794	.	+	.	ID=Dca28094.1.exon6;Parent=Dca28094.1
scaffold28	Augus-PASA	exon	412878	412977	.	+	.	ID=Dca28094.1.exon7;Parent=Dca28094.1
scaffold28	Augustus	exon	413510	413724	.	+	.	ID=Dca28094.1.exon8;Parent=Dca28094.1