Carnation DB

Dca2817.1

Annotation

5-exons
f-1
sp|B9H548_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_861927#unknown#0F0P0C
sp|G7LAC7_MEDTR#BZIP transcription factor bZIP133#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g091250#unknown#0F0P0C
Repeat List (scaffold11)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2817.1	1	626	628	60.35	626	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H548_POPTR	1	638	639	99.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2817.1	1	621	628	55.09	621	51	3e-166
Target_name	Start	End	Length	Cov(%)
AT4G39790.1	9	656	657	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11	Augustus	mRNA	242976	245932	.	+	.	ID=Dca2817.1;Parent=Dca2817
scaffold11	Augustus	exon	242976	243696	.	+	.	ID=Dca2817.1.exon1;Parent=Dca2817.1
scaffold11	Augustus	exon	244105	244182	.	+	.	ID=Dca2817.1.exon2;Parent=Dca2817.1
scaffold11	Augustus	exon	244576	244793	.	+	.	ID=Dca2817.1.exon3;Parent=Dca2817.1
scaffold11	Augustus	exon	244898	245121	.	+	.	ID=Dca2817.1.exon4;Parent=Dca2817.1
scaffold11	Augustus	exon	245287	245932	.	+	.	ID=Dca2817.1.exon5;Parent=Dca2817.1