Dca28183.1
Annotation
- 2-exons
- f-1
- sp|B2BXY8_9BRAS#Non-LTR retrotransposon transposase#Arabidopsis cebennensis#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold2808)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28183.1 |
32 |
166 |
202 |
31.18 |
135 |
46 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXY8_9BRAS |
626 |
759 |
799 |
16.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28183.1 |
21 |
147 |
202 |
23.76 |
127 |
37 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G42905.1 |
129 |
254 |
258 |
48.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2808 |
Augustus |
mRNA |
35493 |
37692 |
. |
+ |
. |
ID=Dca28183.1;Parent=Dca28183 |
| scaffold2808 |
Augustus |
exon |
35493 |
35985 |
. |
+ |
. |
ID=Dca28183.1.exon1;Parent=Dca28183.1 |
| scaffold2808 |
Augustus |
exon |
37577 |
37692 |
. |
+ |
. |
ID=Dca28183.1.exon2;Parent=Dca28183.1 |
